Dear Mohammaed,
The issue is not so clear for me. As I understood you are running first payroll after re-hiring a personnel. Am I right?
Let me have a explanation of /561 and why you have it. Maybe you find it helpful to follow your issue.
In a retroactive case if the net amount is negative(Total payment amounts - Total deduction amounts) system does not generate a negative payment and put it into /561 to deduct in next payroll period.
In next payroll system loads /561 to /563 then deduct it from /550 and generates /560 if the result is positive otherwise system will do the same method of above. I mean it will generate /561 and ....
In other word system do like this:
/550 = /101 - /110
X = /550 – (/563 + /552)
If (X) > 0 then
generate /560 and put X into
else
generate /561 and put X into
Hope this help you to find the source of issue.
By the way I don't recommend manual inputs too. It's better to follow the log of payroll and find the root of issue.
Cheers,
Omid